Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934692.1_cds_XP_016480696.1_72112
CDS Infomation

[gene=LOC107801819] [db_xref=GeneID:107801819] [protein=ubiquitin carboxyl-terminal hydrolase 12-like] [protein_id=XP_016480696.1] [location=complement(join(110755..111226,111548..111675,111822..111896,112025..112141,112225..112311,112677..112742,112904..112969,113950..114021,114103..114204,114355..114532,114616..114671,115248..115616))] [gbkey=CDS]
Sequence

ATGGCTTCTCTACAACAGTCAACACTAGATTTGATAACTCAGCTTCTTCTTGATGATGAT
GCTTTTTTGGTAAGTTACGGCTCATCAGAAACCAACACTAGTTTTGATTCAAAAACTGAA
TTAAATAGATTTAAATTCGAGGGAAAAACAGAGGATTCAGTTCAGAAAATGGAAGATACC
TTGAAGCGTTACAGAGGGATCAGGCAAAGGCCAGGGGGGAAATTTGTTTCAGAGGTTAGT
GACCCGACCCGAAAAGGGAAACGGGTTTGGCTTGGAACTTTTGATACTGCAACAGAAGCA
GCCATGGCATATGATCGTGCAGCGCTTAAACTAAGAGGGAGCAGAGCAATTCTGAATTTC
CCACGGAAGCTTGTCCACTTTCGAGCACTGGAGAAACCGAAGGAGGAGGATTTCTGTCTG
GAGTTAGCAAAAAGTGATACATATGATGATGTAGTGGAGAGAGTGGCGCAGCGGCTTGGT
GTGGATGATCCCTCCAAAATTAGGCTTACTCCACACAACTACTACTCTCAGCAACCCAAG
CCTAACCCCATCAAATATCGGTCCGTGGATCATTTGGTAGACATGCTAATCCATGACAAT
CAGATTTCTGATATTCTTTATTACGAAGTTCTGGACATTCCTCTGCCAGAATTACAATGT
CTGAAGACGTTCAAAGTTGATTTTCATCATTCTAAGAAGGATGAGGTTGAAATTTTGAAT
GTAAGATTGCCTAAGCAGAGTACCGTGAGGGATTTTCTTAATGGAATCAAATCAAAGGTA
GAGTTGTCCCATCCAAATGCAGAGCTTAGATTACTCGAAATCTTCTATCACAAGATTTTT
AAGATCTTTCCGCTCACTGAAAAGTTTGAGAATATAAATGACCAGTATTGGACATTGCGG
GCAGAGGAGATACCAGAGGAGGAGAAAAATCTTGGTCCCCATGATCGTCTAATTCATGTT
TACCATTTCACGAAAGAGACTCCACAAAATCAAATGCCAGTGCAGAATTTTGGAGAACCT
TTCTTTCTGGTCATCCATGAAGGTGAAACTTTAGCGGAGATTAAAGTGCGCATTCAAAAG
AAATTGCAGGTTCCAGATGAGGAGTTTTCTAAGTGGAAATTTGCATTTTTATCATTGGGG
CACCCTGAATACCTTCAGGATACGGACATTGTATCCAGCCGCTTTCAGAGGAGATATGTT
TATGATGCTTGGGAGCAGTACCTTGGATTGGAGCATGCAGATAATACATCTAGGAGGCCA
TATGTTAGTCAGGTAAATTCTCTAGTTCTTGNGAGACTCGAACTCATAACCTCTTGTCGA
TCAACACTGAAACGAGTATGTAGAGAATACAATATCTCTAGATGGCCACATCATAAGACC
AGAAAGGTTTATCGCCGTGTTAGCCAAGGCGTATCTCTACAAAGTGCTGAACAATATGTG
GAAGATACTCAACAATGTCCTGATCTGTCCCATGAAAAAGGCACAGATCTTTTGGCGCCG
GCTGCAACAGAAAAACCTTGTGATAATCTGATGACTTTAAAGGTTACATATAGAGGCGAT
ATCATTAAGTTTCAACTCTCCCCTTCAGCAACCAGGGTAGAACTGGAGGTGGAAGTGGAA
AAGAGGTTTAACATATCACTTCAAAGGTGTTCAATCAAGTATCAAGATGACGACGATGAT
TGGATTTTGATAACTAGTAATTCAGATTTGAGGGACGGTATGAATTCATTGAGATTGTTA
GGAAGAACTACTATGAAATTACTGGTTACCCCAATATCTGAGACATGA

Peptide Sequence

PEP ID

XP_016480696.1
PEP Infomation

PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Nicotiana tabacum]
Sequence

MASLQQSTLDLITQLLLDDDAFLVSYGSSETNTSFDSKTELNRFKFEGKTEDSVQKMEDT
LKRYRGIRQRPGGKFVSEVSDPTRKGKRVWLGTFDTATEAAMAYDRAALKLRGSRAILNF
PRKLVHFRALEKPKEEDFCLELAKSDTYDDVVERVAQRLGVDDPSKIRLTPHNYYSQQPK
PNPIKYRSVDHLVDMLIHDNQISDILYYEVLDIPLPELQCLKTFKVDFHHSKKDEVEILN
VRLPKQSTVRDFLNGIKSKVELSHPNAELRLLEIFYHKIFKIFPLTEKFENINDQYWTLR
AEEIPEEEKNLGPHDRLIHVYHFTKETPQNQMPVQNFGEPFFLVIHEGETLAEIKVRIQK
KLQVPDEEFSKWKFAFLSLGHPEYLQDTDIVSSRFQRRYVYDAWEQYLGLEHADNTSRRP
YVSQVNSLVLXRLELITSCRSTLKRVCREYNISRWPHHKTRKVYRRVSQGVSLQSAEQYV
EDTQQCPDLSHEKGTDLLAPAATEKPCDNLMTLKVTYRGDIIKFQLSPSATRVELEVEVE
KRFNISLQRCSIKYQDDDDDWILITSNSDLRDGMNSLRLLGRTTMKLLVTPISET

Transcript Sequence

Gene sequence data has not been registered.